Curate all Zenodo records of a register — curate_register_zenodo

Curate all Zenodo records of a register against the curation policy

Usage

curate_register_zenodo_records(
  register_table,
  zenodo = NULL,
  fields = c("title", "publisher", "language", "resource_type", "identifiers", "reviews",
    "repository"),
  dry_run = TRUE,
  register_dir = getwd()
)

Arguments

register_table: a register `data.frame` with columns `Certificate`, `Report` and `Repository`
zenodo: a `zen4R` ZenodoManager, only needed when `dry_run = FALSE`
fields: which classes of correction to consider, see [curate_zenodo_record()]
dry_run: if TRUE (the default) only report what would change
register_dir: directory holding `register.csv`

Value

a data.frame with one row per record: `certificate`, `record_id`, `applied` (the corrections), `manual` (findings needing a human), `error`

Details

Runs [curate_zenodo_record()] over every register entry whose report is a Zenodo DOI. Intended for the mechanical corrections, whose target values follow from the certificate ID or from `codecheck.yml`; `fields` therefore defaults to everything except "creators", which needs a human because splitting a name is wrong for group entries.

One record failing does not stop the run: its error is recorded in the result and the loop continues.

Author

Daniel Nuest